Pathway Analysis using Logistic Regression
Browse Concepts
| Concept Name | Gene List Download |
| ABC transporters | hsa mmu rno |
| Acute myeloid leukemia | hsa mmu rno |
| Adherens junction | hsa mmu rno |
| Adipocytokine signaling pathway | hsa mmu rno |
| African trypanosomiasis | hsa mmu rno |
| Alanine, aspartate and glutamate metabolism | hsa mmu rno |
| Aldosterone-regulated sodium reabsorption | hsa mmu rno |
| Allograft rejection | hsa mmu rno |
| alpha-Linolenic acid metabolism | hsa mmu rno |
| Alzheimer's disease | hsa mmu rno |
| Amino sugar and nucleotide sugar metabolism | hsa mmu rno |
| Aminoacyl-tRNA biosynthesis | hsa mmu rno |
| Amoebiasis | hsa mmu rno |
| Amyotrophic lateral sclerosis (ALS) | hsa mmu rno |
| Antigen processing and presentation | hsa mmu rno |
| Apoptosis | hsa mmu rno |
| Arachidonic acid metabolism | hsa mmu rno |
| Arginine and proline metabolism | hsa mmu rno |
| Arrhythmogenic right ventricular cardiomyopathy (ARVC) | hsa mmu rno |
| Ascorbate and aldarate metabolism | hsa mmu rno |
| Asthma | hsa mmu rno |
| Autoimmune thyroid disease | hsa mmu rno |
| Axon guidance | hsa mmu rno |
| B cell receptor signaling pathway | hsa mmu rno |
| Bacterial invasion of epithelial cells | hsa mmu rno |
| Basal cell carcinoma | hsa mmu rno |
| Basal transcription factors | hsa mmu rno |
| Base excision repair | hsa mmu rno |
| beta-Alanine metabolism | hsa mmu rno |
| Bile secretion | hsa mmu rno |
| Biosynthesis of unsaturated fatty acids | hsa mmu rno |
| Bladder cancer | hsa mmu rno |
| Butanoate metabolism | hsa mmu rno |
| Butirosin and neomycin biosynthesis | hsa mmu rno |
| Caffeine metabolism | hsa mmu rno |
| Calcium signaling pathway | hsa mmu rno |
| Carbohydrate digestion and absorption | hsa mmu rno |
| Cardiac muscle contraction | hsa mmu rno |
| Cell adhesion molecules (CAMs) | hsa mmu rno |
| Cell cycle | hsa mmu rno |
| Chagas disease (American trypanosomiasis) | hsa mmu rno |
| Chemokine signaling pathway | hsa mmu rno |
| Chronic myeloid leukemia | hsa mmu rno |
| Circadian rhythm - mammal | hsa mmu rno |
| Citrate cycle (TCA cycle) | hsa mmu rno |
| Collecting duct acid secretion | hsa mmu rno |
| Colorectal cancer | hsa mmu rno |
| Complement and coagulation cascades | hsa mmu rno |
| Cyanoamino acid metabolism | hsa mmu rno |
| Cysteine and methionine metabolism | hsa mmu rno |
| Cytokine-cytokine receptor interaction | hsa mmu rno |
| Cytosolic DNA-sensing pathway | hsa mmu rno |
| Dilated cardiomyopathy | hsa mmu rno |
| DNA replication | hsa mmu rno |
| Dorso-ventral axis formation | hsa mmu rno |
| Drug metabolism - cytochrome P450 | hsa mmu rno |
| Drug metabolism - other enzymes | hsa mmu rno |
| ECM-receptor interaction | hsa mmu rno |
| Endocytosis | hsa mmu rno |
| Endometrial cancer | hsa mmu rno |
| Epithelial cell signaling in Helicobacter pylori infection | hsa mmu rno |
| ErbB signaling pathway | hsa mmu rno |
| Ether lipid metabolism | hsa mmu rno |
| Fat digestion and absorption | hsa mmu rno |
| Fatty acid biosynthesis | hsa mmu rno |
| Fatty acid elongation in mitochondria | hsa mmu rno |
| Fatty acid metabolism | hsa mmu rno |
| Fc epsilon RI signaling pathway | hsa mmu rno |
| Fc gamma R-mediated phagocytosis | hsa mmu rno |
| Focal adhesion | hsa mmu rno |
| Folate biosynthesis | hsa mmu rno |
| Fructose and mannose metabolism | hsa mmu rno |
| Galactose metabolism | hsa mmu rno |
| Gap junction | hsa mmu rno |
| Gastric acid secretion | hsa mmu rno |
| Glioma | hsa mmu rno |
| Glutathione metabolism | hsa mmu rno |
| Glycerolipid metabolism | hsa mmu rno |
| Glycerophospholipid metabolism | hsa mmu rno |
| Glycine, serine and threonine metabolism | hsa mmu rno |
| Glycosaminoglycan biosynthesis - chondroitin sulfate | hsa mmu rno |
| Glycosaminoglycan biosynthesis - heparan sulfate | hsa mmu rno |
| Glycosaminoglycan biosynthesis - keratan sulfate | hsa mmu rno |
| Glycosaminoglycan degradation | hsa mmu rno |
| Glycosphingolipid biosynthesis - ganglio series | hsa mmu rno |
| Glycosphingolipid biosynthesis - globo series | hsa mmu rno |
| Glycosphingolipid biosynthesis - lacto and neolacto series | hsa mmu rno |
| Glycosylphosphatidylinositol(GPI)-anchor biosynthesis | hsa mmu rno |
| Glyoxylate and dicarboxylate metabolism | hsa mmu rno |
| GnRH signaling pathway | hsa mmu rno |
| Graft-versus-host disease | hsa mmu rno |
| Hedgehog signaling pathway | hsa mmu rno |
| Hematopoietic cell lineage | hsa mmu rno |
| Hepatitis C | hsa mmu rno |
| Histidine metabolism | hsa mmu rno |
| Homologous recombination | hsa mmu rno |
| Huntington's disease | hsa mmu rno |
| Hypertrophic cardiomyopathy (HCM) | hsa mmu rno |
| Inositol phosphate metabolism | hsa mmu rno |
| Insulin signaling pathway | hsa mmu rno |
| Intestinal immune network for IgA production | hsa mmu rno |
| Jak-STAT signaling pathway | hsa mmu rno |
| Leishmaniasis | hsa mmu rno |
| Leukocyte transendothelial migration | hsa mmu rno |
| Linoleic acid metabolism | hsa mmu rno |
| Long-term depression | hsa mmu rno |
| Long-term potentiation | hsa mmu rno |
| Lysine degradation | hsa mmu rno |
| Lysosome | hsa mmu rno |
| Malaria | hsa mmu rno |
| MAPK signaling pathway | hsa mmu rno |
| Maturity onset diabetes of the young | hsa mmu rno |
| Melanogenesis | hsa mmu rno |
| Melanoma | hsa mmu rno |
| Metabolism of xenobiotics by cytochrome P450 | hsa mmu rno |
| Mineral absorption | hsa mmu rno |
| Mismatch repair | hsa mmu rno |
| mRNA surveillance pathway | hsa mmu rno |
| mTOR signaling pathway | hsa mmu rno |
| Mucin type O-Glycan biosynthesis | hsa mmu rno |
| N-Glycan biosynthesis | hsa mmu rno |
| Natural killer cell mediated cytotoxicity | hsa mmu rno |
| Neuroactive ligand-receptor interaction | hsa mmu rno |
| Neurotrophin signaling pathway | hsa mmu rno |
| Nicotinate and nicotinamide metabolism | hsa mmu rno |
| Nitrogen metabolism | hsa mmu rno |
| NOD-like receptor signaling pathway | hsa mmu rno |
| Non-homologous end-joining | hsa mmu rno |
| Non-small cell lung cancer | hsa mmu rno |
| Notch signaling pathway | hsa mmu rno |
| Nucleotide excision repair | hsa mmu rno |
| Olfactory transduction | hsa mmu rno |
| One carbon pool by folate | hsa mmu rno |
| Oocyte meiosis | hsa mmu rno |
| Osteoclast differentiation | hsa mmu rno |
| Other glycan degradation | hsa mmu rno |
| Other types of O-glycan biosynthesis | hsa mmu rno |
| Oxidative phosphorylation | hsa mmu rno |
| p53 signaling pathway | hsa mmu rno |
| Pancreatic cancer | hsa mmu rno |
| Pancreatic secretion | hsa mmu rno |
| Pantothenate and CoA biosynthesis | hsa mmu rno |
| Parkinson's disease | hsa mmu rno |
| Pathogenic Escherichia coli infection | hsa mmu rno |
| Pathways in cancer | hsa mmu rno |
| Pentose and glucuronate interconversions | hsa mmu rno |
| Pentose phosphate pathway | hsa mmu rno |
| Peroxisome | hsa mmu rno |
| Phagosome | hsa mmu rno |
| Phenylalanine metabolism | hsa mmu rno |
| Phenylalanine, tyrosine and tryptophan biosynthesis | hsa mmu rno |
| Phosphatidylinositol signaling system | hsa mmu rno |
| Phototransduction | hsa mmu rno |
| Porphyrin and chlorophyll metabolism | hsa mmu rno |
| PPAR signaling pathway | hsa mmu rno |
| Primary bile acid biosynthesis | hsa mmu rno |
| Primary immunodeficiency | hsa mmu rno |
| Prion diseases | hsa mmu rno |
| Progesterone-mediated oocyte maturation | hsa mmu rno |
| Propanoate metabolism | hsa mmu rno |
| Prostate cancer | hsa mmu rno |
| Proteasome | hsa mmu rno |
| Protein digestion and absorption | hsa mmu rno |
| Protein export | hsa mmu rno |
| Protein processing in endoplasmic reticulum | hsa mmu rno |
| Proximal tubule bicarbonate reclamation | hsa mmu rno |
| Purine metabolism | hsa mmu rno |
| Pyrimidine metabolism | hsa mmu rno |
| Pyruvate metabolism | hsa mmu rno |
| Regulation of actin cytoskeleton | hsa mmu rno |
| Regulation of autophagy | hsa mmu rno |
| Renal cell carcinoma | hsa mmu rno |
| Renin-angiotensin system | hsa mmu rno |
| Retinol metabolism | hsa mmu rno |
| Rheumatoid arthritis | hsa mmu rno |
| Riboflavin metabolism | hsa mmu rno |
| Ribosome | hsa mmu rno |
| Ribosome biogenesis in eukaryotes | hsa mmu rno |
| RIG-I-like receptor signaling pathway | hsa mmu rno |
| RNA degradation | hsa mmu rno |
| RNA polymerase | hsa mmu rno |
| RNA transport | hsa mmu rno |
| Salivary secretion | hsa mmu rno |
| Selenocompound metabolism | hsa mmu rno |
| Shigellosis | hsa mmu rno |
| Small cell lung cancer | hsa mmu rno |
| SNARE interactions in vesicular transport | hsa mmu rno |
| Sphingolipid metabolism | hsa mmu rno |
| Spliceosome | hsa mmu rno |
| Staphylococcus aureus infection | hsa mmu rno |
| Starch and sucrose metabolism | hsa mmu rno |
| Steroid biosynthesis | hsa mmu rno |
| Steroid hormone biosynthesis | hsa mmu rno |
| Sulfur metabolism | hsa mmu rno |
| Sulfur relay system | hsa mmu rno |
| Synthesis and degradation of ketone bodies | hsa mmu rno |
| Systemic lupus erythematosus | hsa mmu rno |
| T cell receptor signaling pathway | hsa mmu rno |
| Taste transduction | hsa mmu rno |
| Taurine and hypotaurine metabolism | hsa mmu rno |
| Terpenoid backbone biosynthesis | hsa mmu rno |
| TGF-beta signaling pathway | hsa mmu rno |
| Thyroid cancer | hsa mmu rno |
| Tight junction | hsa mmu rno |
| Toll-like receptor signaling pathway | hsa mmu rno |
| Toxoplasmosis | hsa mmu rno |
| Tryptophan metabolism | hsa mmu rno |
| Type I diabetes mellitus | hsa mmu rno |
| Type II diabetes mellitus | hsa mmu rno |
| Tyrosine metabolism | hsa mmu rno |
| Ubiquinone and other terpenoid-quinone biosynthesis | hsa mmu rno |
| Ubiquitin mediated proteolysis | hsa mmu rno |
| Valine, leucine and isoleucine biosynthesis | hsa mmu rno |
| Valine, leucine and isoleucine degradation | hsa mmu rno |
| Vascular smooth muscle contraction | hsa mmu rno |
| Vasopressin-regulated water reabsorption | hsa mmu rno |
| VEGF signaling pathway | hsa mmu rno |
| Vibrio cholerae infection | hsa mmu rno |
| Viral myocarditis | hsa mmu rno |
| Vitamin B6 metabolism | hsa mmu rno |
| Vitamin digestion and absorption | hsa mmu rno |
| Wnt signaling pathway | hsa mmu rno |
Copyright 2010 The University of Michigan
Developed under the support of the NIH/National Library of Medicine
Grant # R01 LM008106 ("Representing and Acquiring Knowledge of Genome
Regulation") and the National Center for Integrative Biomedical
Informatics (NCIBI), NIH Grant # U54 DA021519 01A1
Terms of Use